ERX471817
Illumina HiSeq 2000 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Yeast strain
Cell type
YEF473A
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-Genotype
HTZ1::mycx9 HSF1::flagx3
ArrayExpress-Species
Saccharomyces cerevisiae
ArrayExpress-TimePoint
15
ENA first public
2014-03-25
ENA last update
2018-03-08
ENA-CHECKLIST
ERC000011
External Id
SAMEA2250558
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2014-03-25T09:09:15Z
INSDC last update
2018-03-08T16:54:34Z
INSDC status
public
Submitter Id
WT_RNApol_II_ChIP_30C_15min-sc-1770083
common name
baker's yeast
sample description
Chromatin Immunoprecipitation of RNA Pol II - RNA Pol II antibody
sample name
WT_RNApol_II_ChIP_30C_15min-sc-1770083
strain
YEF473A

Sequenced DNA Library

library_name
8932559
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChiP-seq

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

sacCer3

Number of total reads
1686535
Reads aligned (%)
97.0
Duplicates removed (%)
1.7
Number of peaks
670 (qval < 1E-05)

Base call quality data from DBCLS SRA