ERX471773
Illumina HiSeq 2000 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Yeast strain
Cell type
YEF473A
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-Genotype
htz1 HSF1::flagx3
ArrayExpress-Species
Saccharomyces cerevisiae
ArrayExpress-TimePoint
30
ENA first public
2014-03-25
ENA last update
2018-03-08
ENA-CHECKLIST
ERC000011
External Id
SAMEA2250604
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2014-03-25T09:09:15Z
INSDC last update
2018-03-08T16:54:56Z
INSDC status
public
Submitter Id
htz1_mutant_RNApol_II_ChIP_34C_30min-sc-1770129
common name
baker's yeast
sample description
Chromatin Immunoprecipitation of RNA Pol II - RNA Pol II antibody
sample name
htz1_mutant_RNApol_II_ChIP_34C_30min-sc-1770129
strain
YEF473A

Sequenced DNA Library

library_name
8932595
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChiP-seq

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

sacCer3

Number of total reads
1622808
Reads aligned (%)
96.1
Duplicates removed (%)
4.0
Number of peaks
589 (qval < 1E-05)

Base call quality data from DBCLS SRA