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For sacCer3
BigWig
Peak-call (q < 1E-05)
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Peak-call (q < 1E-20)
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For sacCer3
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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: YEF473A
ATCC
MeSH
RIKEN BRC
ERX471770
Illumina HiSeq 2000 paired end sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Yeast strain
Cell type
YEF473A
NA
NA
Attributes by original data submitter
Sample
ArrayExpress-Genotype
HTZ1::mycx9 HSF1::flagx3
ArrayExpress-Species
Saccharomyces cerevisiae
ArrayExpress-TimePoint
30
ENA first public
2014-03-25
ENA last update
2018-03-08
ENA-CHECKLIST
ERC000011
External Id
SAMEA2250562
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2014-03-25T09:09:15Z
INSDC last update
2018-03-08T16:54:50Z
INSDC status
public
Submitter Id
WT_RNApol_II_ChIP_34C_30min-sc-1770087
common name
baker's yeast
sample description
Chromatin Immunoprecipitation of RNA Pol II - RNA Pol II antibody
sample name
WT_RNApol_II_ChIP_34C_30min-sc-1770087
strain
YEF473A
Sequenced DNA Library
library_name
8932563
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChiP-seq
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
1688315
Reads aligned (%)
96.9
Duplicates removed (%)
2.1
Number of peaks
659 (qval < 1E-05)
Base call quality data from
DBCLS SRA