ERX471725
Illumina HiSeq 2000 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Yeast strain
Cell type
YEF473A
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-Genotype
HTZ1::mycx9 HSF1::flagx3
ArrayExpress-Species
Saccharomyces cerevisiae
ArrayExpress-TimePoint
5
ENA-CHECKLIST
ERC000011
ENA-FIRST-PUBLIC
2014-03-25T09:09:15Z
ENA-LAST-UPDATE
2018-03-08T16:54:50Z
External Id
SAMEA2250556
INSDC center name
SC
INSDC first public
2014-03-25T09:09:15Z
INSDC last update
2018-03-08T16:54:50Z
INSDC status
public
Submitter Id
WT_RNApol_II_ChIP_34C_5min-sc-1770081
common name
baker's yeast
sample description
Chromatin Immunoprecipitation of RNA Pol II - RNA Pol II antibody
sample name
WT_RNApol_II_ChIP_34C_5min-sc-1770081
scientific_name
Saccharomyces cerevisiae
strain
YEF473A

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

Where can I get the processing logs?

Read processing pipeline log

sacCer3

Number of total reads
1793488
Reads aligned (%)
96.0
Duplicates removed (%)
1.8
Number of peaks
624 (qval < 1E-05)

Base call quality data from DBCLS SRA