ERX3797319
Illumina HiSeq 2500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-SPECIES
Mus musculus
ENA first public
2020-01-07
ENA last update
2018-12-12
ENA-CHECKLIST
ERC000011
External Id
SAMEA5166649
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2020-01-07T17:10:38Z
INSDC last update
2018-12-12T09:52:12Z
INSDC status
public
Submitter Id
e01d6662-f6df-11e8-a390-68b59976a384
common name
house mouse
sample name
e01d6662-f6df-11e8-a390-68b59976a384
subject id
1992STDY7748071

Sequenced DNA Library

library_name
NT1494553J
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Custom

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9797247
Reads aligned (%)
74.4
Duplicates removed (%)
28.9
Number of peaks
7082 (qval < 1E-05)

mm9

Number of total reads
9797247
Reads aligned (%)
74.4
Duplicates removed (%)
28.9
Number of peaks
7054 (qval < 1E-05)

Base call quality data from DBCLS SRA