Antigen

Antigen Class

TFs and others

Antigen

GFP

Cell type

Cell type Class

Neural

Cell type

Neurons

MeSH Description

The basic cellular units of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the NERVOUS SYSTEM.

Sample

ArrayExpress-CellType

Neurons

ArrayExpress-DevelopmentalStage

Adult

ArrayExpress-Genotype

MeCP2 GFP tagged

ArrayExpress-Immunoprecipitate

Chromotek GFP trap Agarose

ArrayExpress-OrganismPart

Brain

ArrayExpress-Phenotype

wildtype

ArrayExpress-Sex

male

ArrayExpress-Species

Mus musculus

ENA first public

2014-01-07

ENA last update

2018-03-08

ENA-CHECKLIST

ERC000011

External Id

SAMEA2201269

INSDC center alias

SC

INSDC center name

Wellcome Sanger Institute

INSDC first public

2014-01-07T10:35:03Z

INSDC last update

2018-03-08T16:46:43Z

INSDC status

public

Submitter Id

IN_N-sc-2013-10-03T14:37:03Z-1712950

common name

house mouse

sample description

Input from GFP high sample (MeCP2 GFP from 15 BL 6 male)

sample name

IN_N-sc-2013-10-03T14:37:03Z-1712950

strain

Bl6 MeCP2 GFP

Sequenced DNA Library

library_name

8307452

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

qPCR only

Sequencing Platform

instrument_model

Illumina MiSeq

mm10

Number of total reads

2535620

Reads aligned (%)

91.5

Duplicates removed (%)

69.8

Number of peaks

59 (qval < 1E-05)

mm9

Number of total reads

2535620

Reads aligned (%)

91.3

Duplicates removed (%)

69.6

Number of peaks

38 (qval < 1E-05)