ERX348540
Illumina Genome Analyzer IIx sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA-CHECKLIST
ERC000011
ENA-FIRST-PUBLIC
2013-12-02
ENA-LAST-UPDATE
2013-11-29
External Id
SAMEA2266442
INSDC center alias
NIMR
INSDC center name
MRC National Institute for Medical Research
INSDC first public
2013-12-02T17:01:12Z
INSDC last update
2013-11-29T19:58:41Z
INSDC status
public
Submitter Id
Input_DNA
common name
house mouse
sample name
Input_DNA

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
31566584
Reads aligned (%)
97.1
Duplicates removed (%)
31.9
Number of peaks
15302 (qval < 1E-05)

mm9

Number of total reads
31566584
Reads aligned (%)
96.9
Duplicates removed (%)
32.0
Number of peaks
15736 (qval < 1E-05)

Base call quality data from DBCLS SRA