ERX3264301
Illumina HiSeq 2500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Erythroid progenitors
NA
NA

Attributes by original data submitter

Sample

ENA first public
2020-01-06
ENA last update
2019-03-20
ENA-CHECKLIST
ERC000011
External Id
SAMEA5522778
INSDC center alias
ERASMUS MC
INSDC center name
ERASMUS MC
INSDC first public
2020-01-06T04:04:26Z
INSDC last update
2019-03-20T10:15:01Z
INSDC status
public
Submitter Id
BCL11A-2_I16-1584-01
cell type
Erythroid progenitors
common name
human
dev stage
Adult
sample name
BCL11A-2_I16-1584-01
tissue type
Peripheral blood

Sequenced DNA Library

library_name
I16- 1584
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
PCR
library_construction_protocol
Nextera TruSeq Rapid v2

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18633318
Reads aligned (%)
98.3
Duplicates removed (%)
20.1
Number of peaks
1752 (qval < 1E-05)

hg19

Number of total reads
18633318
Reads aligned (%)
97.8
Duplicates removed (%)
20.4
Number of peaks
1705 (qval < 1E-05)

Base call quality data from DBCLS SRA