ERX3251923
Illumina HiSeq 2500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Erythroid progenitors
NA
NA

Attributes by original data submitter

Sample

ENA first public
2020-01-06
ENA last update
2019-03-15
ENA-CHECKLIST
ERC000011
External Id
SAMEA5424643
INSDC center alias
ERASMUS MC
INSDC center name
ERASMUS MC
INSDC first public
2020-01-06T04:04:25Z
INSDC last update
2019-03-15T10:10:05Z
INSDC status
public
Submitter Id
KLF1-35_I16-1584-08-m9
cell type
Erythroid progenitors
common name
human
dev stage
Adult
sample name
KLF1-35_I16-1584-08-m9
tissue type
Peripheral blood

Sequenced DNA Library

library_name
I16-1584
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
PCR
library_construction_protocol
Nextera TruSeq Rapid v2

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
23254648
Reads aligned (%)
97.2
Duplicates removed (%)
28.7
Number of peaks
11517 (qval < 1E-05)

hg19

Number of total reads
23254648
Reads aligned (%)
96.7
Duplicates removed (%)
28.9
Number of peaks
11539 (qval < 1E-05)

Base call quality data from DBCLS SRA