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For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: ES cells
ATCC
MeSH
RIKEN BRC
ERX2901785
Illumina HiSeq 2500 sequencing; Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (ChIP-seq)
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA
Attributes by original data submitter
Sample
ENA first public
2018-11-23
ENA last update
2018-11-13
ENA-CHECKLIST
ERC000011
External Id
SAMEA5084579
INSDC center alias
WELLCOME TRUST SANGER INSTITUTE
INSDC center name
WELLCOME TRUST SANGER INSTITUTE
INSDC first public
2018-11-23T17:03:11Z
INSDC last update
2018-11-13T15:56:02Z
INSDC status
public
Submitter Id
E-MTAB-61651542124302:EB_Day4_rep1
broker name
ArrayExpress
cell line
E14-ES
cell type
embryonic stem cell
common name
house mouse
disease
normal
genotype
Dpf2-FLAG
growth condition
3D culture
organism part
inner cell mass
sample name
E-MTAB-61651542124302:EB_Day4_rep1
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
123118624
Reads aligned (%)
96.4
Duplicates removed (%)
22.5
Number of peaks
39698 (qval < 1E-05)
mm9
Number of total reads
123118624
Reads aligned (%)
96.2
Duplicates removed (%)
22.5
Number of peaks
39441 (qval < 1E-05)
Base call quality data from
DBCLS SRA