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For rn6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For rn6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
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For rn6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: Unclassified
ATCC
MeSH
RIKEN BRC
ERX2901254
Illumina HiSeq 2000 sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Unclassified
Cell type
Unclassified
NA
NA
Attributes by original data submitter
Sample
ENA first public
2018-11-13
ENA last update
2018-11-13
ENA-CHECKLIST
ERC000011
External Id
SAMEA5081868
INSDC center alias
UNIVERSIDAD DE CANTABRIA
INSDC center name
UNIVERSIDAD DE CANTABRIA
INSDC first public
2018-11-13T17:03:42Z
INSDC last update
2018-11-13T15:08:58Z
INSDC status
public
Submitter Id
CHIPMNT2
common name
Norway rat
sample name
CHIPMNT2
Sequenced DNA Library
library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
rn6
Number of total reads
42675204
Reads aligned (%)
99.7
Duplicates removed (%)
0.0
Number of peaks
651 (qval < 1E-05)
Base call quality data from
DBCLS SRA