Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-SEX
female
ArrayExpress-SPECIES
Mus musculus
ENA first public
2018-11-06
ENA last update
2017-10-23
ENA-CHECKLIST
ERC000011
External Id
SAMEA104357207
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-11-06T17:03:27Z
INSDC last update
2017-10-23T12:15:30Z
INSDC status
public
Submitter Id
d94216c8-b4c6-11e7-bc98-68b599768938
common name
house mouse
gender
female
sample name
d94216c8-b4c6-11e7-bc98-68b599768938
subject id
1992STDY7155677

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
12171311
Reads aligned (%)
72.8
Duplicates removed (%)
26.5
Number of peaks
285 (qval < 1E-05)

mm9

Number of total reads
12171311
Reads aligned (%)
72.7
Duplicates removed (%)
26.9
Number of peaks
249 (qval < 1E-05)

Base call quality data from DBCLS SRA