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For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: NA
ATCC
MeSH
RIKEN BRC
ERX2874523
Illumina HiSeq 2500 paired end sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
No description
Cell type
NA
NA
NA
Attributes by original data submitter
Sample
ArrayExpress-SEX
female
ArrayExpress-SPECIES
Mus musculus
ENA first public
2018-11-06
ENA last update
2017-10-23
ENA-CHECKLIST
ERC000011
External Id
SAMEA104357214
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-11-06T17:03:27Z
INSDC last update
2017-10-23T12:15:32Z
INSDC status
public
Submitter Id
d92e38ce-b4c6-11e7-bc98-68b599768938
common name
house mouse
gender
female
sample name
d92e38ce-b4c6-11e7-bc98-68b599768938
subject id
1992STDY7155673
Sequenced DNA Library
library_name
NT1196635A
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
qPCR only
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
10271391
Reads aligned (%)
75.0
Duplicates removed (%)
28.1
Number of peaks
283 (qval < 1E-05)
mm9
Number of total reads
10271391
Reads aligned (%)
74.9
Duplicates removed (%)
28.3
Number of peaks
246 (qval < 1E-05)
Base call quality data from
DBCLS SRA