ERX2868915
Illumina HiSeq 2500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-SPECIES
Homo sapiens
ENA first public
2018-10-30
ENA last update
2018-10-29
ENA-CHECKLIST
ERC000011
External Id
SAMEA5048475
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T14:14:49Z
INSDC last update
2018-10-29T09:58:10Z
INSDC status
public
Submitter Id
6da1d7e2-5b10-11e7-bff3-68b59976a384
common name
human
sample name
6da1d7e2-5b10-11e7-bff3-68b59976a384
subject id
dg_cttv0206994276

Sequenced DNA Library

library_name
NT1101298H
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Nextera dual index qPCR only

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
44838488
Reads aligned (%)
91.1
Duplicates removed (%)
83.8
Number of peaks
3039 (qval < 1E-05)

hg19

Number of total reads
44838488
Reads aligned (%)
88.9
Duplicates removed (%)
84.7
Number of peaks
2915 (qval < 1E-05)

Base call quality data from DBCLS SRA