Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

Alias
2ed0fd84-fcfc-11e7-8f97-3c4a9275d6c8
ENA checklist
ERC000011
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2018-10-30T17:02:45Z
INSDC last update
2018-10-29T10:01:21Z
INSDC status
public
SRA accession
ERS2860424
SUBJECT_ID
dg_cttv0207282415
Sample Name
ERS2860424
Title
Jurkat_BR2_C_CTCF

Sequenced DNA Library

library_name
DN518363E:C7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq Auto

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
30207886
Reads aligned (%)
186.4
Duplicates removed (%)
1.4
Number of peaks
43808 (qval < 1E-05)

hg38

Number of total reads
30207886
Reads aligned (%)
188.2
Duplicates removed (%)
1.2
Number of peaks
45029 (qval < 1E-05)

Base call quality data from DBCLS SRA