Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Cardiovascular

Cell type

Het-1A

Primary Tissue

Esophagus

Tissue Diagnosis

Normal

Sample

ENA first public

2018-08-30

ENA last update

2018-06-22

ENA-CHECKLIST

ERC000011

External Id

SAMEA4753711

INSDC center alias

UOM

INSDC center name

University of Manchester

INSDC first public

2018-08-30T17:02:49Z

INSDC last update

2018-06-22T14:00:08Z

INSDC status

public

Submitter Id

E-MTAB-6931:Het1A-GATA6_4d_rep1

broker name

ArrayExpress

cell line

Het1A

cell type

epithelial cell

common name

human

disease

normal

genotype

GATA6-tet-on

organism part

esophagus

phenotype

doxycyclin mediated overexpression of GATA6

sample name

E-MTAB-6931:Het1A-GATA6_4d_rep1

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

22017025

Reads aligned (%)

97.8

Duplicates removed (%)

6.1

Number of peaks

16287 (qval < 1E-05)

hg19

Number of total reads

22017025

Reads aligned (%)

97.2

Duplicates removed (%)

6.2

Number of peaks

16176 (qval < 1E-05)