Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

ENA first public
2018-05-31
ENA last update
2018-05-21
ENA-CHECKLIST
ERC000011
External Id
SAMEA4671560
INSDC center alias
University of Cambridge
INSDC center name
University of Cambridge
INSDC first public
2018-05-31T17:02:01Z
INSDC last update
2018-05-21T17:01:05Z
INSDC status
public
Submitter Id
E-MTAB-6804:8h_H3K27ac_R1
broker name
ArrayExpress
cell type
embryonic stem cell
common name
house mouse
genotype
Mbd3 inducible
sample name
E-MTAB-6804:8h_H3K27ac_R1
strain
129/Ola

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
32243483
Reads aligned (%)
97.7
Duplicates removed (%)
10.1
Number of peaks
30844 (qval < 1E-05)

mm9

Number of total reads
32243483
Reads aligned (%)
97.6
Duplicates removed (%)
10.2
Number of peaks
30877 (qval < 1E-05)

Base call quality data from DBCLS SRA