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For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: Sperm
ATCC
MeSH
RIKEN BRC
ERX2270585
Illumina HiSeq 2000 sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Gonad
Cell type
Sperm
NA
NA
Attributes by original data submitter
Sample
ENA first public
2018-02-10
ENA last update
2017-12-11
ENA-CHECKLIST
ERC000011
External Id
SAMEA104422202
INSDC center alias
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC center name
MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS
INSDC first public
2018-02-10T17:01:51Z
INSDC last update
2017-12-11T11:14:19Z
INSDC status
public
Submitter Id
O282K4me3
common name
house mouse
dev stage
old
exp_mark
H3K4me3
exp_type
ChIPseq
sample name
O282K4me3
tissue type
sperm
Sequenced DNA Library
library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
29516784
Reads aligned (%)
97.2
Duplicates removed (%)
83.8
Number of peaks
17775 (qval < 1E-05)
mm9
Number of total reads
29516784
Reads aligned (%)
97.1
Duplicates removed (%)
83.9
Number of peaks
17748 (qval < 1E-05)
Base call quality data from
DBCLS SRA