Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBX7

Cell type

Cell type Class
Blood
Cell type
CD34 Hematopoietic stem cells
NA
NA

Attributes by original data submitter

Sample

Alias
EV CBX7 #3
Description
CBX7 ChIP-Seq in CD34+ cells overexpressing EV (Experiment 3)
ENA checklist
ERC000011
INSDC center alias
EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN
INSDC center name
EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN
INSDC first public
2019-01-09T17:03:24Z
INSDC last update
2017-09-28T10:40:37Z
INSDC status
public
SRA accession
ERS1949874
Sample Name
ERS1949874
Title
EV CBX7#3
cell_type
HuCD34+ HSPC

Sequenced DNA Library

library_name
SAMEA104324896
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

hg19

Number of total reads
41902720
Reads aligned (%)
111.2
Duplicates removed (%)
41.0
Number of peaks
592 (qval < 1E-05)

hg38

Number of total reads
41902720
Reads aligned (%)
113.3
Duplicates removed (%)
40.4
Number of peaks
812 (qval < 1E-05)

Base call quality data from DBCLS SRA