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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: CD34+
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
ERX2242358
NextSeq 500 paired end sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Blood
Cell type
CD34+
NA
NA
Attributes by original data submitter
Sample
ENA first public
2019-01-09
ENA last update
2017-09-28
ENA-CHECKLIST
ERC000011
External Id
SAMEA104324891
INSDC center alias
EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN
INSDC center name
EUROPEAN RESEARCH INSTITUTE FOR THE BIOLOGY OF AGEING, UNIVERSITY OF GRONINGEN, UNIVERSITY MEDICAL CENTER GRONINGEN
INSDC first public
2019-01-09T17:03:24Z
INSDC last update
2017-09-28T10:40:37Z
INSDC status
public
Submitter Id
CBX7 H3K27me3 #1
cell type
HuCD34+ HSPC
common name
human
sample name
CBX7 H3K27me3 #1
Sequenced DNA Library
library_name
SAMEA104324891
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
NextSeq 500
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
5016390
Reads aligned (%)
96.5
Duplicates removed (%)
5.4
Number of peaks
375 (qval < 1E-05)
hg19
Number of total reads
5016390
Reads aligned (%)
96.1
Duplicates removed (%)
5.5
Number of peaks
386 (qval < 1E-05)
Base call quality data from
DBCLS SRA