Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-Species
Mus musculus
ENA first public
2013-01-25
ENA last update
2018-03-08
External Id
SAMEA1696619
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2013-01-25T09:53:47Z
INSDC last update
2018-03-08T15:26:14Z
INSDC status
public
Submitter Id
2E_1_H3K9me3_SP_SOX2CTAP-sc-2011-05-12T12:23:53Z-1137510
common name
house mouse
sample name
2E_1_H3K9me3_SP_SOX2CTAP-sc-2011-05-12T12:23:53Z-1137510

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
51690388
Reads aligned (%)
86.2
Duplicates removed (%)
24.8
Number of peaks
3069 (qval < 1E-05)

mm9

Number of total reads
51690388
Reads aligned (%)
85.8
Duplicates removed (%)
26.6
Number of peaks
3050 (qval < 1E-05)

Base call quality data from DBCLS SRA