ERX1886410
Illumina HiSeq 2500 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2019-09-26
ENA last update
2017-02-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA81191668
INSDC center alias
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC center name
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC first public
2019-09-26T17:03:47Z
INSDC last update
2017-02-09T10:36:11Z
INSDC status
public
Submitter Id
TG_chip_0034
common name
human
sample name
TG_chip_0034

Sequenced DNA Library

library_name
slkp_input_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
10924004
Reads aligned (%)
99.0
Duplicates removed (%)
3.4
Number of peaks
373 (qval < 1E-05)

hg19

Number of total reads
10924004
Reads aligned (%)
98.2
Duplicates removed (%)
4.4
Number of peaks
552 (qval < 1E-05)

Base call quality data from DBCLS SRA