ERX1886399
Illumina HiSeq 2500 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2019-09-26
ENA last update
2017-02-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA81187168
INSDC center alias
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC center name
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC first public
2019-09-26T17:03:47Z
INSDC last update
2017-02-09T10:36:11Z
INSDC status
public
Submitter Id
TG_chip_0028
common name
human
sample name
TG_chip_0028

Sequenced DNA Library

library_name
bcbl1_h3k4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14877066
Reads aligned (%)
87.0
Duplicates removed (%)
10.5
Number of peaks
31298 (qval < 1E-05)

hg19

Number of total reads
14877066
Reads aligned (%)
86.7
Duplicates removed (%)
10.9
Number of peaks
31150 (qval < 1E-05)

Base call quality data from DBCLS SRA