ERX1886394
Illumina HiSeq 2500 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2019-09-26
ENA last update
2017-02-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA81185668
INSDC center alias
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC center name
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC first public
2019-09-26T17:03:47Z
INSDC last update
2017-02-09T10:36:11Z
INSDC status
public
Submitter Id
TG_chip_0026
common name
house mouse
sample name
TG_chip_0026

Sequenced DNA Library

library_name
mle12_mhv68d50_kshv_5dpi_input_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9764594
Reads aligned (%)
97.9
Duplicates removed (%)
12.4
Number of peaks
120 (qval < 1E-05)

mm9

Number of total reads
9764594
Reads aligned (%)
97.6
Duplicates removed (%)
12.6
Number of peaks
252 (qval < 1E-05)

Base call quality data from DBCLS SRA