ERX1886389
Illumina HiSeq 2500 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2019-09-26
ENA last update
2017-02-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA81183418
INSDC center alias
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC center name
Heinrich-Pette-Institute, Leibniz-Institute for experimental Virology
INSDC first public
2019-09-26T17:03:47Z
INSDC last update
2017-02-09T10:36:10Z
INSDC status
public
Submitter Id
TG_chip_0023
common name
house mouse
sample name
TG_chip_0023

Sequenced DNA Library

library_name
mle12_mhv68d50_kshv_5dpi_h3k4me3_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
8911709
Reads aligned (%)
92.5
Duplicates removed (%)
11.0
Number of peaks
13461 (qval < 1E-05)

mm9

Number of total reads
8911709
Reads aligned (%)
92.3
Duplicates removed (%)
11.2
Number of peaks
13461 (qval < 1E-05)

Base call quality data from DBCLS SRA