ERX1886295
NextSeq 500 paired end sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-02-09
ENA last update
2017-02-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA81136918
INSDC center alias
WEIZMANN INSTITUTE OF SCIENCE
INSDC center name
WEIZMANN INSTITUTE OF SCIENCE
INSDC first public
2017-02-09T17:01:42Z
INSDC last update
2017-02-09T08:18:31Z
INSDC status
public
Submitter Id
WCE_T4_2
common name
house mouse
sample name
WCE_T4_2

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
1512079
Reads aligned (%)
94.7
Duplicates removed (%)
6.8
Number of peaks
35 (qval < 1E-05)

mm9

Number of total reads
1512079
Reads aligned (%)
94.6
Duplicates removed (%)
7.1
Number of peaks
29 (qval < 1E-05)

Base call quality data from DBCLS SRA