Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Pluripotent stem cell

Cell type

iPSC derived macrophages

NA

NA

Sample

Material

cell line

Sample Name

HPSI0114i-fikt_3 derived macrophage day 33 with IFNg

Sex

male

age

50-54

cell type

iPSC derived cell line

differentiation start date

2015/10/03

disease state

normal

ethnicity

White - White British

project

HipSci

sampling date

2015/11/05

target cell type

macrophage

time point

day 33

treatment

interferon gamma

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

3191401

Reads aligned (%)

84.4

Duplicates removed (%)

4.0

Number of peaks

85 (qval < 1E-05)

hg19

Number of total reads

3191401

Reads aligned (%)

83.8

Duplicates removed (%)

4.2

Number of peaks

80 (qval < 1E-05)