Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Pluripotent stem cell

Cell type

iPSC derived macrophages

NA

NA

Sample

Material

cell line

Sample Name

HPSI0214i-eiwy_1 derived macrophage day 40 with IFNg

Sex

female

age

65-69

cell type

iPSC derived cell line

differentiation start date

2015/10/23

disease state

normal

ethnicity

White - White British

project

HipSci

sampling date

2015/12/02

target cell type

macrophage

time point

day 40

treatment

interferon gamma

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

3984593

Reads aligned (%)

74.9

Duplicates removed (%)

23.1

Number of peaks

5626 (qval < 1E-05)

hg19

Number of total reads

3984593

Reads aligned (%)

74.7

Duplicates removed (%)

23.1

Number of peaks

5595 (qval < 1E-05)