ERX132827
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ArrayExpress-Species
mus musculus
ENA first public
2012-07-18
ENA last update
2018-03-08
External Id
SAMEA1469149
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2012-07-18T10:54:17Z
INSDC last update
2018-03-08T15:24:51Z
INSDC status
public
Submitter Id
m_wt_saline_NRO_M-sc-2011-04-13T15:18:22Z-1122728
common name
house mouse
sample description
Library PCR
sample name
m_wt_saline_NRO_M-sc-2011-04-13T15:18:22Z-1122728

Sequenced DNA Library

library_name
2543211
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
qPCR only

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38745475
Reads aligned (%)
66.8
Duplicates removed (%)
57.5
Number of peaks
6715 (qval < 1E-05)

mm9

Number of total reads
38745475
Reads aligned (%)
66.8
Duplicates removed (%)
57.5
Number of peaks
6636 (qval < 1E-05)

Base call quality data from DBCLS SRA