ERX132803
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2012-07-18
ENA last update
2018-03-08
External Id
SAMEA1469145
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2012-07-18T10:54:17Z
INSDC last update
2018-03-08T15:25:33Z
INSDC status
public
Submitter Id
m_wt3T3_H3K4me3_M-sc-2011-02-24-985953
common name
house mouse
sample name
m_wt3T3_H3K4me3_M-sc-2011-02-24-985953

Sequenced DNA Library

library_name
1456235
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Standard

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
33889988
Reads aligned (%)
92.8
Duplicates removed (%)
23.1
Number of peaks
26132 (qval < 1E-05)

mm9

Number of total reads
33889988
Reads aligned (%)
92.4
Duplicates removed (%)
23.0
Number of peaks
26174 (qval < 1E-05)

Base call quality data from DBCLS SRA