Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Dendritic Cells
MeSH Description
ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Attributes by original data submitter

Sample

ArrayExpress-CellType
Dendritic cells (Cd11c+ sorted)
ArrayExpress-Immunoprecipitate
Anti H3K27me3 Millipore 07-449 (lot 1662421)
ArrayExpress-Species
Mus musculus
ENA first public
2012-07-18
ENA last update
2018-03-08
External Id
SAMEA1464055
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2012-07-18T10:53:21Z
INSDC last update
2018-03-08T15:32:10Z
INSDC status
public
Submitter Id
m_DC_H3K27me3_P-sc-2011-11-15T14:51:03Z-987450
common name
house mouse
sample description
DNA isolated from ChIP
sample name
m_DC_H3K27me3_P-sc-2011-11-15T14:51:03Z-987450

Sequenced DNA Library

library_name
1456232
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
qPCR only

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
38539505
Reads aligned (%)
72.1
Duplicates removed (%)
41.2
Number of peaks
346 (qval < 1E-05)

mm9

Number of total reads
38539505
Reads aligned (%)
72.0
Duplicates removed (%)
41.3
Number of peaks
381 (qval < 1E-05)

Base call quality data from DBCLS SRA