ERX132623
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

External Id
SAMEA1464073
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2012-07-18T17:02:55Z
INSDC last update
2018-03-08T15:24:54Z
INSDC status
public
Submitter Id
m_NaiveTh_MBD_P-sc-2010-03-05-3426
common name
house mouse
sample name
m_NaiveTh_MBD_P-sc-2010-03-05-3426

Sequenced DNA Library

library_name
54930
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Standard

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
14778306
Reads aligned (%)
91.7
Duplicates removed (%)
52.3
Number of peaks
61071 (qval < 1E-05)

mm9

Number of total reads
14778306
Reads aligned (%)
90.2
Duplicates removed (%)
51.8
Number of peaks
60635 (qval < 1E-05)

Base call quality data from DBCLS SRA