Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
UT-7
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

ArrayExpress-CellType
UT7-Epo
ArrayExpress-Immunoprecipitate
K27me3
ArrayExpress-Species
Homo Sapiens
ENA first public
2016-01-12
ENA last update
2018-03-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA3504457
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2016-01-12T09:05:11Z
INSDC last update
2018-03-09T04:33:31Z
INSDC status
public
Submitter Id
UT7_BR2_K27me3-sc-2380171
common name
human
sample description
UT7_K27me3_ChIP_DNA
sample name
UT7_BR2_K27me3-sc-2380171

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
17590581
Reads aligned (%)
98.6
Duplicates removed (%)
0.8
Number of peaks
348 (qval < 1E-05)

hg19

Number of total reads
17590581
Reads aligned (%)
97.8
Duplicates removed (%)
0.8
Number of peaks
236 (qval < 1E-05)

Base call quality data from DBCLS SRA