ERX1270492
Illumina HiSeq 1500 sequencing

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

ENA first public
2017-12-25
ENA last update
2015-12-29
ENA-CHECKLIST
ERC000011
External Id
SAMEA3719569
INSDC center alias
WELLCOME TRUST SANGER INSTITUTE
INSDC center name
WELLCOME TRUST SANGER INSTITUTE
INSDC first public
2017-12-25T17:02:29Z
INSDC last update
2015-12-29T13:48:23Z
INSDC status
public
Submitter Id
ChipSeq_08383
common name
house mouse
dev stage
embryo
sample name
ChipSeq_08383

Sequenced DNA Library

library_name
unspecified
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22420358
Reads aligned (%)
97.3
Duplicates removed (%)
20.7
Number of peaks
430 (qval < 1E-05)

mm9

Number of total reads
22420358
Reads aligned (%)
96.9
Duplicates removed (%)
20.7
Number of peaks
505 (qval < 1E-05)

Base call quality data from DBCLS SRA