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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K27ac
wikigenes
PDBj
CellType: KU812
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
ERX1126210
Illumina HiSeq 2000 paired end sequencing
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K27ac
Cell type
Cell type Class
Blood
Cell type
KU812
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous
Attributes by original data submitter
Sample
ArrayExpress-CellType
KU812
ArrayExpress-GrowthCondition
RPMI1640_10% FBS
ArrayExpress-Immunoprecipitate
H3K27ac
ArrayExpress-Phenotype
Normal
ArrayExpress-Species
Homo Sapien
ENA first public
2015-09-22
ENA last update
2018-03-09
ENA-CHECKLIST
ERC000011
External Id
SAMEA3368318
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2015-09-22T09:32:36Z
INSDC last update
2018-03-09T00:40:24Z
INSDC status
public
Submitter Id
KU812_BR1_TR2_K27ac-sc-2285808
common name
human
sample description
KU812 ChIP DNA
sample name
KU812_BR1_TR2_K27ac-sc-2285808
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
7994334
Reads aligned (%)
99.0
Duplicates removed (%)
9.2
Number of peaks
13889 (qval < 1E-05)
hg19
Number of total reads
7994334
Reads aligned (%)
98.6
Duplicates removed (%)
9.2
Number of peaks
13839 (qval < 1E-05)
Base call quality data from
DBCLS SRA