Antigen

Antigen Class

TFs and others

Antigen

GFP

Cell type

Cell type Class

Neural

Cell type

Neurons

MeSH Description

The basic cellular units of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the NERVOUS SYSTEM.

Sample

ArrayExpress-Age

2-3 months

ArrayExpress-CellType

Neurons

ArrayExpress-DevelopmentalStage

Adult

ArrayExpress-Genotype

MeCP2 wildtype GFP

ArrayExpress-Immunoprecipitate

GFP IP

ArrayExpress-OrganismPart

Brain

ArrayExpress-Sex

male

ArrayExpress-Species

mouse

ENA first public

2015-06-30

ENA last update

2018-03-08

ENA-CHECKLIST

ERC000011

External Id

SAMEA3283590

INSDC center alias

SC

INSDC center name

Wellcome Sanger Institute

INSDC first public

2015-06-30T09:39:13Z

INSDC last update

2018-03-08T23:24:40Z

INSDC status

public

Submitter Id

SL270215_1-sc-2241329

common name

house mouse

sample description

ChIP DNA from sorted neurons from MeCP2 GFP mouse brain

sample name

SL270215_1-sc-2241329

strain

Bl6

Sequenced DNA Library

library_name

13204613

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

qPCR only

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

13899021

Reads aligned (%)

90.7

Duplicates removed (%)

79.2

Number of peaks

111 (qval < 1E-05)

mm9

Number of total reads

13899021

Reads aligned (%)

88.9

Duplicates removed (%)

79.3

Number of peaks

138 (qval < 1E-05)