Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Cell line
Cell type
S2

Cell type information


Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by Original Data Submitter


Alias
E-MTAB-1112:Input_S2_A_raw_reads
Broker name
ArrayExpress
CellLine
S2
Description
Protocols: Drosophila larva were grown at 25 C purification protocol is detailed in Conrad et al.
INSDC center alias
EMBL Heidelberg
INSDC center name
EMBL Heidelberg
INSDC first public
2012-08-01T17:00:54Z
INSDC last update
2018-03-08T15:46:35Z
INSDC status
public
SRA accession
ERS139357
Sample Name
ERS139357
Title
Input_S2_A_raw_reads

Metadata from Sequence Read Archive

Library Description


library_name
Input_S2_A_raw_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Drosophila larva were grown at 25 C purification protocol is detailed in Conrad et al.

Platform Information


instrument_model
Illumina Genome Analyzer II

External Database Query

Logs in read processing pipeline


Number of total reads
38580283
Reads aligned (%)
98.7
Duplicates removed (%)
16.7
Number of peaks
6907 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA