Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Larvae
Cell type
Salivary glands

Cell type information


NA
NA

Attributes by Original Data Submitter


Alias
E-MTAB-911:input_male_wt_reads
Broker name
ArrayExpress
Description
Protocols: Drosophila larva were grown at 25 C
DevelopmentalStage
3rd instar larva
Genotype
wild_type
INSDC center alias
EMBL Heidelberg
INSDC center name
EMBL Heidelberg
INSDC first public
2012-05-14T11:50:36Z
INSDC last update
2018-03-08T15:47:02Z
INSDC status
public
Immunoprecipitate
input
OrganismPart
salivary gland
SRA accession
ERS138511
Sample Name
ERS138511
Sex
male
Title
input_male_wt_reads

Metadata from Sequence Read Archive

Library Description


library_name
input_male_wt_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq purification protocol is detailed in Conrad et al.

Platform Information


instrument_model
Illumina Genome Analyzer II

External Database Query

Logs in read processing pipeline


Number of total reads
7143508
Reads aligned (%)
92.9
Duplicates removed (%)
3.4
Number of peaks
2836 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA