Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
mof

Cell type

Cell type Class
Larvae
Cell type
Salivary glands
NA
NA

Attributes by original data submitter

Sample

Alias
E-MTAB-911:MOF_female_wt_reads
Broker name
ArrayExpress
Description
Protocols: Drosophila larva were grown at 25 C
DevelopmentalStage
3rd instar larva
Genotype
wild_type
INSDC center alias
EMBL Heidelberg
INSDC center name
EMBL Heidelberg
INSDC first public
2012-05-14T11:50:36Z
INSDC last update
2018-03-08T15:47:02Z
INSDC status
public
Immunoprecipitate
anti-MOF
OrganismPart
salivary gland
SRA accession
ERS138508
Sample Name
ERS138508
Sex
female
Title
MOF_female_wt_reads

Sequenced DNA Library

library_name
MOF_female_wt_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq purification protocol is detailed in Conrad et al.

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

dm3

Number of total reads
9935297
Reads aligned (%)
69.7
Duplicates removed (%)
8.0
Number of peaks
5172 (qval < 1E-05)

dm6

Number of total reads
9935297
Reads aligned (%)
69.6
Duplicates removed (%)
8.1
Number of peaks
5240 (qval < 1E-05)

Base call quality data from DBCLS SRA