ERX101806
MOF, H4 and H4K16ac ChIP-seq experiments in D.melanogaster

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
mof

Cell type

Cell type Class
Larvae
Cell type
Salivary glands
NA
NA

Attributes by original data submitter

Sample

ENA-FIRST-PUBLIC
2012-05-14T11:50:36Z
ENA-LAST-UPDATE
2018-03-08T15:47:02Z
External Id
SAMEA1322607
INSDC center name
EMBL Heidelberg
INSDC first public
2012-05-14T11:50:36Z
INSDC last update
2018-03-08T15:47:02Z
INSDC status
public
Submitter Id
E-MTAB-911:MOF_female_wt_reads
broker name
ArrayExpress
common name
fruit fly
developmental stage
3rd instar larva
genotype
wild_type
immunoprecipitate
anti-MOF
organism part
salivary gland
sample name
E-MTAB-911:MOF_female_wt_reads
scientific_name
Drosophila melanogaster
sex
female

Sequenced DNA Library

library_name
MOF_female_wt_reads
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq purification protocol is detailed in Conrad et al.

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
9935297
Reads aligned (%)
75.7
Duplicates removed (%)
8.1
Number of peaks
5240 (qval < 1E-05)

dm3

Number of total reads
9935297
Reads aligned (%)
75.8
Duplicates removed (%)
8.0
Number of peaks
5172 (qval < 1E-05)

Base call quality data from DBCLS SRA