ERX079876
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2010-03-05
ENA last update
2018-03-08
External Id
SAMEA1094949
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2010-03-05T11:03:59Z
INSDC last update
2018-03-08T15:24:40Z
INSDC status
public
Submitter Id
null-sc-2010-03-05-7349
common name
house mouse
sample name
null-sc-2010-03-05-7349

Sequenced DNA Library

library_name
57520
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChiP-seq

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13896656
Reads aligned (%)
98.1
Duplicates removed (%)
12.6
Number of peaks
513 (qval < 1E-05)

mm9

Number of total reads
13896656
Reads aligned (%)
97.8
Duplicates removed (%)
12.7
Number of peaks
552 (qval < 1E-05)

Base call quality data from DBCLS SRA