ERX079873
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

ENA first public
2010-03-04
ENA last update
2018-03-08
External Id
SAMEA1094946
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2010-03-04T12:02:03Z
INSDC last update
2018-03-08T15:24:38Z
INSDC status
public
Submitter Id
null-sc-2010-03-04-5319
common name
house mouse
sample name
null-sc-2010-03-04-5319

Sequenced DNA Library

library_name
55871
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChiP-seq

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
14959399
Reads aligned (%)
84.9
Duplicates removed (%)
16.0
Number of peaks
3349 (qval < 1E-05)

mm9

Number of total reads
14959399
Reads aligned (%)
84.7
Duplicates removed (%)
16.1
Number of peaks
3370 (qval < 1E-05)

Base call quality data from DBCLS SRA