ERX079863
no title

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

External Id
SAMEA1094959
INSDC center alias
SC
INSDC center name
Wellcome Sanger Institute
INSDC first public
2010-03-05T16:21:35Z
INSDC last update
2018-03-08T15:24:44Z
INSDC status
public
Submitter Id
F1_me3_D1-sc-2010-03-05-3144
common name
house mouse
sample name
F1_me3_D1-sc-2010-03-05-3144

Sequenced DNA Library

library_name
54797
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChiP-seq

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13266804
Reads aligned (%)
51.3
Duplicates removed (%)
6.6
Number of peaks
13453 (qval < 1E-05)

mm9

Number of total reads
13266804
Reads aligned (%)
51.2
Duplicates removed (%)
6.9
Number of peaks
13471 (qval < 1E-05)

Base call quality data from DBCLS SRA