DRX228805
wildtype iTreg 3h ATAC seq 3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
iTreg
NA
NA

Attributes by original data submitter

Sample

sample_name
wildtype_iTreg_3h_3
biological_replicate
3
cell_type
iTreg cell
genotype
wild type
sex
male
strain
C57BL/6J
tissue
CD4 T cell

Sequenced DNA Library

library_name
wildtype_iTreg_3h_ATAC_3
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
PCR

Sequencing Platform

instrument_model
HiSeq X Ten

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
118993543
Reads aligned (%)
93.2
Duplicates removed (%)
59.8
Number of peaks
37276 (qval < 1E-05)

mm9

Number of total reads
118993543
Reads aligned (%)
93.2
Duplicates removed (%)
59.9
Number of peaks
37267 (qval < 1E-05)

Base call quality data from DBCLS SRA