Antigen

Antigen Class

Histone

Antigen

H3.3

Cell type

Cell type Class

Neural

Cell type

KNS-42

Primary Tissue

Brain

Tissue Diagnosis

Glioma

Sample

sample_name

KNS-42_G34V_delta1_antiH3p3

antibody

Anti-histone H3.3 rabbit monoclonal antibody (Abcam)

biomaterial_provider

JCRB cell bank

cell_line

KNS-42

cell_type

glioma

genotype

G34V knocked out

technical_replicate

1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

SMARTer ThruPLEX DNA-seq Kit (Takara Bio)

Sequencing Platform

instrument_model

Illumina NovaSeq 6000

hg38

Number of total reads

28721353

Reads aligned (%)

78.9

Duplicates removed (%)

8.0

Number of peaks

2833 (qval < 1E-05)

hg19

Number of total reads

28721353

Reads aligned (%)

78.0

Duplicates removed (%)

8.0

Number of peaks

2458 (qval < 1E-05)