DRX209665
scATAC 49

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
sc_ATAC

Sequenced DNA Library

library_name
scATAC_49
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9322264
Reads aligned (%)
66.8
Duplicates removed (%)
88.6
Number of peaks
44 (qval < 1E-05)

mm9

Number of total reads
9322264
Reads aligned (%)
66.8
Duplicates removed (%)
88.6
Number of peaks
49 (qval < 1E-05)

Base call quality data from DBCLS SRA