DRX209626
scATAC 9

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
sc_ATAC

Sequenced DNA Library

library_name
scATAC_9
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
8674295
Reads aligned (%)
75.5
Duplicates removed (%)
92.4
Number of peaks
36 (qval < 1E-05)

mm9

Number of total reads
8674295
Reads aligned (%)
75.4
Duplicates removed (%)
92.4
Number of peaks
30 (qval < 1E-05)

Base call quality data from DBCLS SRA