DRX202689
NextSeq 500 sequencing of SAMD00207114

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
Tet2KORx3_myc_input
strain
C57BL/6
genotype
Tet2-fl/fl;Cre-ERT2
infection
RUNX3

Sequenced DNA Library

library_name
Tet2KORx3_myc_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
8785940
Reads aligned (%)
98.5
Duplicates removed (%)
58.0
Number of peaks
115 (qval < 1E-05)

mm9

Number of total reads
8785940
Reads aligned (%)
98.2
Duplicates removed (%)
58.3
Number of peaks
102 (qval < 1E-05)

Base call quality data from DBCLS SRA