DRX171279
Illumina HiSeq 1500 sequencing of SAMD00173566

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
TALL-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

sample_name
TALL-1
cell_line
TALL-1
cell_type
T lymphoblast
disease
Acute T lymphoblastic leukemia
sex
male
tissue_type
Bone marrow

Sequenced DNA Library

library_name
TALL-1_H2AK119ub1_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
17558583
Reads aligned (%)
94.9
Duplicates removed (%)
6.0
Number of peaks
364 (qval < 1E-05)

hg19

Number of total reads
17558583
Reads aligned (%)
94.0
Duplicates removed (%)
7.3
Number of peaks
420 (qval < 1E-05)

Base call quality data from DBCLS SRA