DRX171275
Illumina HiSeq 1500 sequencing of SAMD00173574

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
CD4 CD8 double positive cells
NA
NA

Attributes by original data submitter

Sample

sample_name
KO_DP
sex
female
strain
C57BL6/NCR
tissue_type
Thymus

Sequenced DNA Library

library_name
KO_H2AK119ub1_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
23114452
Reads aligned (%)
90.7
Duplicates removed (%)
14.3
Number of peaks
254 (qval < 1E-05)

mm9

Number of total reads
23114452
Reads aligned (%)
90.5
Duplicates removed (%)
14.3
Number of peaks
245 (qval < 1E-05)

Base call quality data from DBCLS SRA