DRX165593
NextSeq 500 sequencing of SAMD00167158

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
Input_Tet2KO_Empty
fraction
Lin-Kit+
genotype
Tet2-fl/fl;Cre-ERT2
infection
Empty-vector
strain
C57BL/6

Sequenced DNA Library

library_name
Input_Tet2KO_Empty
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37408033
Reads aligned (%)
95.9
Duplicates removed (%)
21.0
Number of peaks
371 (qval < 1E-05)

mm9

Number of total reads
37408033
Reads aligned (%)
95.6
Duplicates removed (%)
20.9
Number of peaks
408 (qval < 1E-05)

Base call quality data from DBCLS SRA